PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07132.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family TCP
Protein Properties Length: 368aa    MW: 40666.4 Da    PI: 8.0866
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07132.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1004.2e-3152166289
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsssg... 88 
                  g+kdrhsk++T +g+RdRRvRls+++a+ ++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ +++         +++s s ++s    g   
  KHN07132.1  52 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTlgypslvscNEVSTSREGS----Gqnt 146
                 689*************************************************************888886665543333113333333333....1234 PP

         TCP  89 ...................k 89 
                                    +
  KHN07132.1 147 llwkpksgemvsddkanwmN 166
                 46655555554332211110 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.2E-2854175IPR005333Transcription factor, TCP
PROSITE profilePS5136930.54854112IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MINSTKEADF PLKQEGLSSG DHEKAKAPST SSSSSQWLKL KDPRIVRVSR AFGGKDRHSK  60
VCTIRGLRDR RVRLSVPTAI HLYDLQDRLG LNQPSKVVDW LLNAAKHEID ELPPLPIPPG  120
NFTLGYPSLV SCNEVSTSRE GSGQNTLLWK PKSGEMVSDD KANWMNRSEG DDDNNHNNSN  180
GKEGSNNNIC HGGTLVLPNN LLPRPNHPSF LSLMNIMPSL GYQWEPNNSA HDVNIGQWQN  240
HGFLNQTDVH SINVVPFPST LALSTGSDTT TTSQILVCPP HGATTQPYFP SSHHVAAMEM  300
NARQINHYQM LSSSSHQNLL ANSLNPSSQQ LMSQSEKLPF SLGIRPKLFH SPNRSESHSQ  360
KDQDLPSK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006603911.10.0PREDICTED: transcription factor TCP13-like
RefseqXP_006603910.10.0PREDICTED: transcription factor TCP13-like
RefseqXP_003554917.10.0PREDICTED: transcription factor TCP13-like
TrEMBLA0A0B2PHV50.0A0A0B2PHV5_GLYSO; Transcription factor TCP13
STRINGGLYMA19G03786.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93234119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02150.18e-39plastid transcription factor 1
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]